Data visualisation

Boxplot Shiny operator for Tercen

Description

The Boxplot Shiny operator is an operator to represent data as boxplots in Tercen.

Usage

Input projection	.
y-axis	numeric, measurement to represent
row	factor, groups corresponding to different boxes along x axis
column	factor (optional), groups corresponding to different plot panels
colors	factor (optional), groups for corresponding to box and points coloring

Output relations	.
Operator view	view of the Shiny application

Details

The operator takes all the values of a cell and represents a boxplot. Depending on the assignment of rows, columns and colors in the Tercen projection, the layout will be different.

References

https://en.wikipedia.org/wiki/Box_plot

GitHub link

boxplot_shiny_operator on GitHub

Hierarchical clustering tree operator

Description

clustering_tree operator returns a hierarchical clustering tree to be projected in Tercen.

Usage

Input projection	.
row	factor, variables to cluster
col	factor, variables to cluster (dist_to variable from a dist operator)
y-axis	numeric, pairwise distance (dist variable from a dist operator)

Output relations	.
presence	numeric, to be projected on y-axis
tree_dim1	factor, to be projected on rows
tree_dim2	factor, to be projected on columns
tip_labels	factor, leaf labels, to be projected on rows

GitHub link

clustering_tree_operator on GitHub

Shiny Heatmap Tercen operator

Description

The Shiny Heatmap operator plots a clustered heatmap.

Usage

Input projection	.
row	factor, variables
col	factor, observations
y-axis	numeric, measurement (corresponding to the color on the heatmap)

Output relations	.
Operator view	view of the Shiny application

References

This operator is based on the pheatmap R function.

See Also

pairwise_distance_operator, hclust_operator

GitHub link

heatmap_shiny_operator on GitHub

Worldmap docker operator

Description

A worldmap view in Tercen.

https://github.com/tercen/worldmap_shiny_docker_operator.git

Build

VERSION=0.1.0
docker build -t agouy/worldmap:$VERSION .
docker push agouy/worldmap:$VERSION
git add -A && git commit -m "$VERSION" && git tag -a $VERSION -m "++" && git push && git push :--tags

GitHub link

worldmap_shiny_docker_operator on GitHub

Shiny World Map Tercen operator

Description

The shiny_worldmap allows one to plot markers on a world map using Tercen.

Usage

Input projection	.
y-axis	longitude (decimal coordinate)
x-axis	latitude (decimal coordinate)
color	measurement

GitHub link

worldmap_shiny_operator on GitHub